I have the console getting sync from the composite video. I did not hook directly to pin 44 on the Hu6260.
My Sony PVM will only accept a c-sync signal for sync. It looks scrambled like in your pics if it is trying to use the composite video signal for sync.
Edit: the mods i have done for my personal setup all use an LM1881 inside the console, and output the resulting c-sync signal on the composite video pin of the SCART cable. However, this method means that i can't use the consoles on a regular tv through composite.
So putting an LM1881 in the cable from the switch to the PVM is probably the best solution, imo. That way he can still use composite video on all his consoles, but that single cable will strip the sync from the composite signal of anything connected to his PVM.