The CD-Rom in question is the original japanese version. The notorious yellow gear has some teeth missing but the system has been working so far, the missing teeth resulted only in additional loading time because the the connection between the yellow wheel and the one next to it hasn't been optimal obviously. Unfortunately, I can't tell if there are more missing teeth now then there were before this incident which leaves me with two options:
1) Instant death: The ISO screwed up my laser and would probably have caused an explosion of the system and maybe some other calamities if I hadn't shut off the power.
2) More missing teeth: The ISO made the CD-Rom work a lot more harder reading the disk, thus some more teeth flew off the gear which is now the reason nothing boots up at all.
Either way I'm thinking about what I should do with the next console. On one hand, I'd like to continue playing burned disks to protect the expensive original disks, as I mentioned before, but also to play some stuff I'm currently developing on the real PC-Engine. On the other hand, I do not want my console to get f*cked up again by those ISO shit.